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We are sorry ezPaycheck cannot handle this special payment. With ezPaycheck, The tax options is employee level settings. We will forward this request to developers. Thank you for your suggestions.

If you have further questions, please contact us directly at services@halfpricesoft.com
Small business payroll & tax software solution
http://www.halfpricesoft.com 
In the case of an S-corp 2% shareholder, health insurance premiums are not a deduction. The premiums paid for the shareholder are subject to income tax withholdings but NOT subject to social security and medicare. How can this be set up in the software?
Tom,

Thank you for using ezPaycheck. Please follow this guide to add this Health Insurance Deduction.

How to Set Up Pre-tax Health Insurance Payroll Deduction
http://www.halfpricesoft...ce-payroll-deduction.asp 

If your insurance deduction is not pre-tax, please do not check any exempt options in step 1.

Thank you.
If you have further questions, please contact us directly at services@halfpricesoft.com
Small business payroll & tax software solution
http://www.halfpricesoft.com 
Trying to figure out how to set up an employee with the following:

over 2% owner in S Corp
Employee pays cost of health insurance

Need to know how to set up so the taxes are applied to the person then the cost deducted.

Thank you,

Tom